PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang07g07250.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family ERF
Protein Properties Length: 184aa    MW: 20461 Da    PI: 5.2485
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang07g07250.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.81.3e-181665255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                     y+GVr +k +g+Wv+eIr+p   g ++r++lg+f t+e+Aa+a++ a++ ++g
  Vang07g07250.1 16 AYRGVRKRK-WGKWVSEIREP---GTKTRIWLGSFETPEMAAAAYDVAALHFRG 65
                    69****999.**********8...325***********************9998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000189.39E-241575No hitNo description
SuperFamilySSF541719.15E-231574IPR016177DNA-binding domain
SMARTSM003809.1E-381679IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.2E-321674IPR001471AP2/ERF domain
PfamPF008477.0E-121665IPR001471AP2/ERF domain
PROSITE profilePS5103223.8811673IPR001471AP2/ERF domain
PRINTSPR003673.7E-101728IPR001471AP2/ERF domain
PRINTSPR003673.7E-103955IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    Send to blast
MDMPPSSTHV GAASSAYRGV RKRKWGKWVS EIREPGTKTR IWLGSFETPE MAAAAYDVAA  60
LHFRGRDARL NFPELASTLP RPVSNNADHI RMAAHEAALR LRTNPAPPEI EIGGGSSTAP  120
PLTVRLSPTQ IQAINDCPMD SPQTWMQMPD TFMMHDQSMM FANGYAFEDN EWEDMQNDSL  180
WDP*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A1e-151273163ATERF1
3gcc_A1e-151273163ATERF1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00227DAPTransfer from AT1G71450Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150430.0AP015043.1 Vigna angularis var. angularis DNA, chromosome 10, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014520106.11e-123PREDICTED: ethylene-responsive transcription factor ERF021-like
SwissprotQ9C9I25e-65ERF21_ARATH; Ethylene-responsive transcription factor ERF021
TrEMBLA0A0S3T6L21e-135A0A0S3T6L2_PHAAN; Uncharacterized protein
STRINGGLYMA11G01640.11e-111(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF17773191
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71450.13e-66ERF family protein